The proto-Nucleic-Acid Builder (pNAB)
PNAB::ConformationSearch Member List

This is the complete list of members for PNAB::ConformationSearch, including all inherited members.

backbone_PNAB::ConformationSearchprivate
backbone_range_PNAB::ConformationSearchprivate
bases_PNAB::ConformationSearchprivate
bu_a_molPNAB::ConformationSearchprivate
ConformationSearch(PNAB::RuntimeParameters &runtime_params, PNAB::Backbone &backbone, PNAB::HelicalParameters &helical_params, PNAB::Bases bases, std::string prefix="test", bool verbose=true)PNAB::ConformationSearch
conv_PNAB::ConformationSearchprivate
coordsPNAB::ConformationSearchprivate
GeneticAlgorithmSearch()PNAB::ConformationSearchprivate
glbl_rot_PNAB::ConformationSearchprivate
glbl_translate_PNAB::ConformationSearchprivate
headPNAB::ConformationSearchprivate
helical_params_PNAB::ConformationSearchprivate
measureDistance(double *coords, unsigned head, unsigned tail)PNAB::ConformationSearchprivate
monomer_num_coords_PNAB::ConformationSearchprivate
MonteCarloSearch(bool weighted)PNAB::ConformationSearchprivate
number_of_candidatesPNAB::ConformationSearchprivate
output_stringPNAB::ConformationSearchprivate
prefix_PNAB::ConformationSearchprivate
printProgress(std::size_t search_index, std::size_t search_size)PNAB::ConformationSearchprivate
RandomSearch(bool weighted)PNAB::ConformationSearchprivate
reportData(PNAB::ConformerData &conf_data)PNAB::ConformationSearchprivate
rlPNAB::ConformationSearchprivate
rng_PNAB::ConformationSearchprivate
rotor_vectorPNAB::ConformationSearchprivate
run()PNAB::ConformationSearch
runtime_params_PNAB::ConformationSearchprivate
step_rot_PNAB::ConformationSearchprivate
step_translate_PNAB::ConformationSearchprivate
SystematicSearch()PNAB::ConformationSearchprivate
tailPNAB::ConformationSearchprivate
unitPNAB::ConformationSearchprivate
verbose_PNAB::ConformationSearchprivate
WeightedDistributions()PNAB::ConformationSearchprivate